Chocolate Thumbprint Cookies

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Author: Ellie
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You’ll fall in love with these rich, chewy Chocolate Thumbprint Cookies that melt in your mouth. Each one is filled with silky chocolate ganache for a decadent bite that’s perfect for Christmas cookie trays, holiday gifting, or cozy weekend baking. They’re made with simple ingredients, yet look like bakery showstoppers. Whether you decorate them with festive sprinkles or keep them classic and glossy, these cookies promise pure chocolate bliss in every bite.

Chocolate thumbprint cookies with glossy ganache and festive sprinkles on a marble board
Chocolate Thumbprint Cookies 13

Why You’ll Love These Chocolate Thumbprint Cookies

These Chocolate Thumbprint Cookies are all about deep chocolate flavor and irresistible texture. Dutch process cocoa gives them a rich, dark taste, while the ganache center adds a creamy surprise. The ingredients are basic, and the steps are easy to follow, even for beginners. They look fancy on any Christmas dessert table but are secretly simple to make. Plus, you can chill the dough ahead of time, bake in batches, or prepare the ganache early for stress-free holiday baking.

Finished chocolate thumbprint cookies with glossy ganache and festive sprinkles on serving board
Chocolate Thumbprint Cookies 14

Key Ingredients You’ll Need

Essential Pantry Ingredients

You’ll need all-purpose flour for structure, Dutch process cocoa for intense chocolate flavor, and a mix of brown and granulated sugar for balanced sweetness and chewiness. Butter keeps the cookies soft, and egg yolks add richness and help bind everything together. Vanilla enhances the flavor beautifully.

Ganache Filling Components

The filling is made with chocolate chips and heavy cream. The warm cream melts the chocolate into a smooth, glossy ganache that sets perfectly in each cookie’s center. It’s rich, creamy, and makes every bite extra indulgent.

Optional Decorations and Variations

Add nonpareils or colorful sprinkles for a festive touch, or try crushed peppermint for a wintery twist. You can even swap the ganache with caramel or hazelnut spread if you’re feeling creative.

Tools and Equipment

You only need a few basics: a mixing bowl, hand or stand mixer, baking sheets, parchment paper, and a small 1/4 teaspoon to make perfect indents. A wire cooling rack and small spoon will also come in handy for filling the centers.

How to Make Chocolate Thumbprint Cookies

Prepare the Chocolate Dough

In one bowl, whisk flour, cocoa powder, salt, and baking powder. In another, beat butter with brown and white sugars until fluffy. Add egg yolks and vanilla, then gradually mix in the dry ingredients until a soft dough forms. The mixture should be rich and pliable, not sticky.

Shape and Chill the Cookies

Scoop about a tablespoon of dough for each cookie, roll into balls, and use your 1/4 teaspoon to press a neat indent in the center. Arrange on parchment-lined trays, then chill for at least an hour. Chilling helps keep the cookies thick and chewy.

Chocolate thumbprint cookie dough balls with indents on baking sheet
Chocolate Thumbprint Cookies 17

Bake to Perfection

Preheat the oven to 350°F (177°C). Bake cookies for 9–11 minutes, just until set. While still warm, gently re-press the centers and, if needed, use a round cutter to reshape. Let cool on the sheet for 5 minutes, then transfer to a rack.

Close-up of chocolate thumbprint cookies with glossy ganache and holiday sprinkles
Chocolate Thumbprint Cookies 18

Make the Ganache Filling

Heat heavy cream until steaming, pour over chocolate chips, and let it sit for one minute. Stir until smooth and shiny. It should be thick but pourable.

Fill and Set

Spoon about one teaspoon of ganache into each cookie’s center. Add sprinkles or crushed candy if desired, then chill for 10–15 minutes until the centers are firm and glossy.

Expert Tips for Perfect Results

Weigh your flour for accuracy to prevent dry cookies. Always chill the dough—this keeps the shape intact and helps flavor deepen. Use a measuring spoon for neat indents rather than your thumb. If cookies spread, reshape with a round cutter while warm. Lastly, don’t overbake; the centers should stay soft for that perfect chewy texture.

Storage and Make-Ahead Instructions

Keep cookies in an airtight container at room temperature for up to three days. For longer storage, freeze them for up to two weeks. You can make the dough ahead, chill overnight, or freeze shaped dough balls to bake fresh later. The ganache can also be made a day in advance and reheated slightly before filling.

Flavor Variations and Custom Ideas

Add crushed peppermint for a festive flavor, drizzle with white chocolate, or fill with caramel or hazelnut spread for a twist. Try a swirl of peanut butter ganache for a crowd-pleasing version. These variations keep your cookie tray exciting and full of surprises.

Troubleshooting Common Issues

If cookies spread too much, the dough may be too warm—chill longer. Cracked tops? Slightly underbake next time. A runny ganache usually means the cream was too hot; let it cool briefly before pouring. If the dough feels dry, add a tiny splash of milk; if sticky, add a touch more flour. Always cool cookies fully before filling to prevent melting centers.

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Conclusion

These Chocolate Thumbprint Cookies bring rich, fudgy joy to any Christmas dessert table. They’re simple to make, yet feel special enough for gifting or sharing at holiday parties. With chewy edges, creamy centers, and endless decorating ideas, they’re bound to become a new family favorite. Share them, gift them, or save a few for yourself—you deserve it. For more holiday baking inspiration, visit my Pinterest page for creative ideas and festive treats.

Chocolate thumbprint cookies with glossy ganache and festive sprinkles on a marble board

Chocolate Thumbprint Cookies

e94924d1608e82913ec4653f32c5b45a269ae3f9aaaf13b8e58786e7d52e56c9?s=30&d=mm&r=gEllie
Rich, chewy Chocolate Thumbprint Cookies filled with smooth chocolate ganache. Perfect for Christmas cookie trays, gifting, or cozy holiday baking.
Prep Time 15 minutes
Cook Time 10 minutes
Chilling Time 1 hour
Total Time 1 hour 25 minutes
Course Cookies, Dessert
Cuisine American
Servings 34 cookies
Calories 140 kcal

Equipment

  • Mixing bowls
  • Electric hand or stand mixer
  • Measuring cups and spoons
  • Baking sheets
  • Parchment paper
  • 1/4 teaspoon for pressing indents
  • Wire cooling rack

Ingredients
  

  • 1 ½ cups (188 g) all-purpose flour
  • ½ cup (40 g) Dutch process cocoa powder
  • ½ tsp salt
  • ½ tsp baking powder
  • ¾ cup (168 g) unsalted butter, softened
  • ¾ cup (165 g) light brown sugar, packed
  • ¼ cup (50 g) granulated sugar
  • 2 large egg yolks, room temperature
  • 1 ½ tsp vanilla bean paste or extract
  • 1 cup (200 g) semi-sweet chocolate chips
  • ½ cup (120 ml) heavy whipping cream
  • optional nonpareils or sprinkles for decorating

Instructions
 

  • In a medium bowl, whisk together flour, cocoa powder, salt, and baking powder until combined.
  • In a separate bowl, cream butter, brown sugar, and granulated sugar for 2 minutes until fluffy. Beat in egg yolks and vanilla until smooth.
  • Gradually add the dry ingredients to the wet mixture until a soft dough forms. Portion dough into 34 balls (1 tablespoon each), place on parchment-lined baking sheets, and use a 1/4 tsp to make indents in each ball. Chill for at least 1 hour.
  • Preheat oven to 350°F (177°C). Arrange cookies 1.5 inches apart and bake for 9–11 minutes. Re-press indents if needed and cool on the baking sheet for 5 minutes before transferring to a wire rack.
  • For the ganache, heat heavy cream until steaming, then pour over chocolate chips. Let sit for 1 minute, then stir until smooth and glossy.
  • Fill each cookie indent with about 1 tsp of ganache. Add sprinkles if desired, then refrigerate for 10–15 minutes to set before serving.

Notes

Use a 1/4 teaspoon to make clean, deep indents instead of your thumb. Weigh flour for accuracy—1 cup equals 120–125 g. Chilling the dough helps cookies maintain their shape. Store in an airtight container for up to 3 days or freeze for 2 weeks.
Keyword Chocolate Thumbprint Cookies, christmas cookies, Ganache cookies, Holiday Baking
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